Exploring Foodborne Pathogen Ecology and Antimicrobial Resistance in the Light of Shotgun Metagenomics

Abstract : In this chapter, applications of shotgun metagenomics for taxonomic profiling and functional investigation of food microbial communities with a focus on antimicrobial resistance (AMR) were overviewed in the light of last data in the field. Potentialities of metagenomic approach, along with the challenges encountered for a wider and routinely use in food safety was discussed.
Document type :
Book sections
Complete list of metadatas

https://hal-anses.archives-ouvertes.fr/anses-02158853
Contributor : Emmanuelle Chiffoleau <>
Submitted on : Tuesday, June 18, 2019 - 1:19:42 PM
Last modification on : Monday, October 21, 2019 - 3:35:01 PM

Identifiers

  • HAL Id : anses-02158853, version 1
  • PUBMED : 30580413

Citation

Arnaud Bridier. Exploring Foodborne Pathogen Ecology and Antimicrobial Resistance in the Light of Shotgun Metagenomics. Foodborne Bacterial Pathogens: Methods and Protocols, ⟨Springer⟩, pp.229-245, 2019, 978-1-4939-9000-9. ⟨anses-02158853⟩

Share

Metrics

Record views

33